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Software Revision Table - Feature Extraction Software 

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Release Version Release Date Reason Remarks Release Notes
10.7.3 20-NOV-2009 Patch Release
  1. Patch release to address issue with how the TotalGeneSignal is calculated for some small fraction of the probes  
See Details
10.7.1 13-OCT-2009 Enhancements & Fixes
  1. Easier manual gridding, with Help Wizard

  2. Separate stream-lined workflow for manual grid finding for Agilent

  3. Automatic alerts when software license update privileges expire

  4. New QC and Minimal text file output package types available

  5. Spike- ins support for miRNA analysis

  6. Improved grid finding for G3 arrays

  7. Improved QC Reports, providing 3 levels of metrics with metrics sets where appropriate

  8. Flipped and rotate function supported for 2um, 3um, and 20 bit images
See Details
10.5.1 05-JAN-2009 Enhancements & Fixes
  1. QC Metrics now associated with the FE protocol

  2. eArray integration

  3. New protocol setup

  4. New “pixels used” view

  5. Sample information integration

  6. Improved QC report for GH

  7. Faster extractions for G3 and 65 µm Agilent arrays
See Details
10.1.1 02-MAY-2008 Support for arrays scanned at 2 µm and 3 µm resolution 
  1. Can grid and extract arrays scanned at 2 µm and 3 µm resolution 

  2. Support for mySQL and other databases

  3. Limited support for FE under Windows Terminal Services

See Details
See Details
9.5.3 09-MAY-2007 Enhancements & Fixes
  1. Migration to SQL Express from MSDE

  2. Update of the Windows installer to enable installation under Windows Server 2003, Windows XP 64-bit, Windows Vista and Windows Vista 64-bit

  3. Limited support for FE under Windows Terminal Services

  4. FE now allows for users to optionally generate the HTML file instead of the PDF file

  5. Outputs from FE 9.5.3 are numerically Identical to FE 9.5.1

See Details
See Details
9.5.1 22-FEB-2007 Enhancements & Fixes
  1. Ability to extract Agilent microRNA (miRNA) microarrays

  2. QC Report as PDF file

  3. Improved gridding and workflow for multiplex microarrays

  4. Improved grid testing for all Agilent microarrays

  5. Better handling of Dye Norm files and improvements to the dye norm Editor

  6. Introduction of Agilent optimized QC metric sets

See Details
See Details
9.1.3 01-JUN-2006 Enhancements & Fixes
  1. Ability to extract high density Agilent microarrays

  2. Improved gridding for Agilent microarray formats

  3. Ability to extract eXtended dynamic range (XDR) paired images from the Agilent scanner

  4. Faster processing of Agilent array images

  5. Ability to handle compressed images

  6. Ability for one Feature Extraction protocol to handle all array formats

  7. Ability to generate compact results

  8. Introduction of the QC chart tool and ability to use QC metrics inside Feature Extraction

See Details
See Details
8.5 01-OCT-2005 Enhancements & Fixes
  1. Gridding improvements

  2. Feature extraction of Agilent 1-color microarrays

  3. Introduction of multiple different QC reports based upon application:
    • 1-color Gene Expression

    • 2-color Gene Expression

    • CGH

  4. Support for Axon Images of 2-color Agilent Array Experiments

  5. Introduction of new Additive Detrending Option: Features in Negative Control Range

  6. Integration with eArray for new design files

  7. Support for a command line version of Feature Extraction

See Details
See Details



 
 
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