| Platform |
FE Protocol |
Agilent Microarray Format |
Scanner* |
Wet Lab Protocol |
| CGH |
CGH-v4_95_Feb07 |
2x11K, 22K, 44K, 2x105K, 4x44K, 8x15K, and 244K |
Agilent or GenePix |
Agilent Oligonucleotide Array-Based CGH for Genomic DNA Analysis v.4.0
(P/N G4410-90010) |
| CGH-v4_95_Tecan_Feb07 |
2x105K and 244K |
Agilent or GenePix |
Agilent Oligonucleotide Array-Based CGH for Genomic DNA Analysis with Tecan HS Pro Hybridization Station
(P/N G4410-90011) |
| ChIP-on-Chip |
ChIP-v1_95_May07 |
4x44K, 2x105K and 244K |
Agilent or GenePix |
Agilent Mammalian ChIP-on-Chip v.9.x (P/N G4481-90010) |
Gene Expression
One-color |
GE1-v5_95_Feb07 |
8x15K, 4x44K, 2x105K and 244K |
Agilent or GenePix |
One-Color Microarray-Based Gene Expression Analysis v.5.5.x
(P/N G4140-90040) |
| GE1-v1_95_Feb07 |
2x11K, 22K and 44K |
Agilent or GenePix |
One-Color Microarray-Based Gene Expression Analysis v.1.0.x
(P/N G4140-90040) |
Gene Expression
Two-color |
GE2-v5_95_Feb07 |
8x15K, 4x44K, 2x105K and 244K |
Agilent or GenePix |
Two-Color Microarray-Based Gene Expression Analysis v.5.5.x
(P/N G4140-90050) |
| GE2-v4_95_Feb07 |
2x11K, 22K and 44K |
Agilent or GenePix |
Two-Color Microarray-Based Gene Expression Analysis v.4.0.x
(P/N G4140-90050) |
| GE2-SSPE_95_Feb07 |
2x11K, 22K and 44K |
Agilent or GenePix |
Agilent 60-mer Oligo Microarray Processing Protocol v.3.0.x (SSPE or SSC Wash)
(P/N G4140-90050 or G4140-90030) |
| GE2-NonAT_95_Feb07 |
Non-Agilent |
Agilent |
Not Applicable |
| microRNA |
miRNA-v1_95_May07 |
8x15K |
Agilent |
miRNA Microarray System Protocol v.1.0 (P/N G4170-90010) |
*Agilent Scanner A or B, GenePix Scanner 4000A or 4000B |