Agilent | GeneSpring GT Software

Rapidly identify disease or phenotype markers

GeneSpring GT is a desktop analysis workbench for analyzing high-volume, high-density genotyping data. The software provides a comprehensive set of linkage and association algorithms that allow researchers to discover relationships between genotypes and phenotypes. Researchers can visually explore fully annotated SNPs and genes at varying levels of detail. Designed for biologists and statisticians, GeneSpring GT is capable of importing, visualizing, and analyzing hundreds of thousands of variation measurements simultaneously, for rapid localization of disease or phenotype markers.

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Features

Version 2.0 now released
Genetic linkage tests use pedigree information to enable researchers to calculate maximum likelihood and estimate recombination frequencies for millions of variations
Linkage disequilibrium tests can test for potential association between phenotypes and marker loci when pedigree information is not available
Transmission disequilibrium tests can provide high-resolution localization of potential markers when many affected individuals and their parents have been genotyped
Loss-of-heterozygosity analysis is essential to genotyping studies in cancer research. Specialized methods allow researchers to identify and compare homozygous regions across individuals and populations
GeneSpring GT offers tools for quantitative case control, ANOVA, multivariate regression, and quality control filters for error detection
Utilizing a patent-pending algorithm, GeneSpring GT provides a novel, highly efficient method for identifying regions that result from the autozygous inheritance of a recessive allele
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