KB005459: Correlation plot removed from 'Quality Control on Samples' window for Agilent Two color technology in GX 10 

In earlier versions of GeneSpring, only cy3 channel values were being considered to show the correlation plot for two-color data. Currently we are considering the ratio between cy3 and cy5 channels. So, it is not an appropriate method of judging correlation between samples, since weightage needs to be given to both the channels. Hence, the correlation plot was removed from two-color Quality Control window in GX10. We are in the process of evaluating more appropriate quality control  graphs that will act as a replacement for the correlation plot for two color data .This feature will be reflected  in the future versions of GeneSpring.