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Click a question below to see the answer:
How does the Filter on Fold Change calculate fold changes in log mode and is it appropriate?
How can I filter genes with reliable measurements?
How do I filter on Fold-Change with my two-color data?
What does the t-test p-value of the Filter on Confidence represent?
If I have two-color data, should I Filter on Confidence using t-test p-values or run an ANOVA using the Statistical Analysis tool?
What thresholds are ideal for each of the aberration algorithms (ie. z-score, ADM-1, etc.)?
I have three groups of samples (A, B, and C) how can I perform a fold change analysis in one shot?
Agilent data contains flags for both, the red and green channels. In a custom data loading, how do I add the flags so that later on can filter my data based on flags?
Agilent FE files contain flags for red and green channels. How do I filter genes based on one of the channels i.e. control or signal?
After performing a fold change analysis I noticed that some of the fold change values are numbers such as 0.1, 0.3 and 0.5. How can I interpret these results?
I have three groups of samples (A, B, and C). How can I perform a fold change analysis in one shot?
