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GeneSpring GX 7
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Clustering & Profile Correlations
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Please select a topic from this section below:
Clustering & Profile Correlations
Data Import & Experiments
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Genomes
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Click a question below to see the answer:
How can I make a tree in GeneSpring that resembles one made in Eisen's TreeView?
Some of the similarities between genes I expect to see in the tree are not occurring. What could be the problem?
What is the number that appears when mousing over a tree branch?
What is the hierarchical clustering algorithm used in GeneSpring GX?
In the k-means clustering tool, what does the option 'Start from current classification' do?
What should I set as the neighborhood radius when clustering with self-organizing maps (SOMs)?
How do I go back to a normal graph view after clustering with K-means, SOM or QT, and how do I change the coloring?
I started a gene tree clustering with 64,000 genes yesterday but as of this morning, it was still not finished. Why is it taking so long?
What is the difference between a k-means, SOM and QT clustering? Which one should I choose?
Where do I select a different correlation from the default one in Find Similar in the Gene Inspector?
What is the default correlation when I select 'Find Similar' function in the Gene Inspector window?
How to calculate similarity of two samples ?
I would like to know how to interpret the graph in the Gene List Inspector using all samples?
How GS determines the height of tree branches?
In a Gene Tree or Condition Tree, when move the mouse over the branches I see a number. What does the number mean?
