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MassHunter BioConfirm Software 

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Software Status Bulletin

G6829AA MassHunter BioConfirm Software rev. B.02.00

 

Revision Log:

Revision Date

Reason For Update

10/17/2008

Final release

1.       Overview

The purpose of this document is to list known problems in the software and any known workarounds or recovery paths. 

2.       Known Problem Summary

The following is a summary of the known problems in the software.  This is not an exhaustive list, but is a list of the problems a customer is most likely to encounter.   This list cross-references items in our Defect tracking database.

SCR #

Title

13340

Number of signficant figures in BioConfirm "Match Diff (ppm) column incorrect.

13992

ChemStation integrator for EIC calculation in deconvolution  does not work.

14186

Missing modification in Mods column in digest list and compound table.

3.       Known Problems Detailed Description

The following is the detailed descriptions of the known problems in the METLIN Personal Metabolite Database software.  This section includes more extensive information from our defect tracking database.  This section also includes any known workarounds or recovery paths

SCR #13340

Title

Number of signficant figures in BioConfirm "Match Diff (ppm) column is incorrect.

Description

In the compound list, the "Match Diff (ppm)" is displayed out to 2 decimal places.  Since the mass accuracy is a few ppm at best, the second digit after the decimal place is unnecessary.  This column should show only 1 digit after the decimal at most.

 

SCR #13992

Title

ChemStation integrator for EIC calculation in deconvolution does not work.

Description

Currently, when a user selects the ChemStation integrator for Integrate and Deconvolute, the deconvolution fails when Extract EIC is selected.

 

SCR #14186

Title

Missing modification in Mods column in digest list and compound table.

Description

To reproduce:

Import a sequence with some modifications, then do a digest with miss cleavage set to 2.

In digest list, some digest pieces (with miss cleavages = 2) will miss a modification in Mods column in digest list.  The Tgt Seq Mass calculation is correct for those digest pieces that miss modification in Mods column.  This is only a UI display problem. The sequence matching result is correct.

Appendix A.  Glossary

Term / Acronym

Definition

UI

User Interface.  The visual representation of the software with which a user interacts.

 

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