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GeneSpring GX Software 

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Bring your expression data to life 

GeneSpring GX provides powerful, accessible statistical tools for fast visualization and analysis of expression data. Designed specifically for the needs of biologists, GeneSpring GX offers an interactive desktop computing environment that promotes investigation and enables understanding of microarray data within a biological context.

Developed on avadis™ from Strand Life Sciences, GeneSpring GX is part of Agilent’s GeneSpring Analysis Platform for systems-level research.

Download FREE Trial - Version 10
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Features
  • New applications - Detect alternative splicing events, Identify microRNAs, Analyze real-time PCR data, and Build relevant biological interaction networks
  • Guided workflow analysis - Step through typical analysis with limited decision points.  Advanced workflows allow expert user to access all GeneSpring GX tools and define parameters and more
  • Suite of statistical tools - Tools include paired and unpaired t-tests, 1-way and multi-way ANOVA, Repeated Measures ANOVA, and permutative method of p-value calculation
  • Tool set for uncovering unique patterns - Use Principal Component Analysis or clustering methods such as Hierarchical, k-means, and SOM and quickly graphically visualize your data
  • Algorithms for pattern correlation - Use training set samples to identify entities whose patterns of expression correlate with disease phenotypes and use them to classify unknown samplesa
  • Results viewable in biological context - Place statistically significant results in biological context using GO analysis, Gene Set Enrichment Analysis (GSEA), Gene Set Analysis (GSA), and pathway analysis
  • Extend functionality through programming - Use JYTHON Application Programming Interface (API) and fully integrated R programming language to extend GeneSpring GX functionality
  • More …

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